Aphinyanaphongs, Y., Ray, B., Statnikov, A., & Krebs, P. (2014). Text Classification for Automatic Detection of Alcohol Use-Related Tweets (pp. 1–5). Presented at the WICSOC 2014, Redwood City, CA.
Plottel, C. S., Aphinyanaphongs, Y., Shao, Y., Micoli, K. J., Fang, Y., Goldberg, J. D., et al. (2014). Designing and Implementing INTREPID, an Intensive Program in Translational Research Methodologies for New Investigators. Clinical and Translational Science, n/a–n/a. doi:10.1111/cts.12198
Aphinyanaphongs Y, Bisakha R, Holloway B, Fu L. “Automatic Classification of Medical Curricula into MeSH Categories with Machine Learning Text Categorization Models: a case study.” AAMC GIR 2014.
Yindalon Aphinyanaphongs, Lawrence Fu, Zhiguo Li, Eric Peskin, Efstratios Efstathiadis, Constantin F. Aliferis, Alexander Statnikov. A Comprehensive Empirical Comparison of Modern Supervised Classification and Feature Selection Methods for Text Categorization. Journal of the American Society for Information Science and Technology (JASIST), 2014.
Bisakha Ray, Lawrence Fu, William Holloway, Yin Aphinyanaphongs. “Feasibility of Machine Learning Based Automatic Classification of Medical School Curricula.” Accepted for Presentation. AMIA Fall 2013.
Van Cleave J, Aphinyanaphongs Y, Brosch S, Schmidt B. “Do Health Record Text Data Reflect Pain Severity Among Individuals with Malignant Oral Lesions” Academy Health 2013 Annual Meeting.
Aphinyanaphongs Y, Fu LD, Aliferis CF. “Identifying unproven cancer treatments on the health web: addressing accuracy, generalizability and scalability.” Studies in health technology and informatics. 2013;192:667-71.
Fu LD, Aphinyanaphongs Y, Aliferis CF. “Computer models for identifying instrumental citations in the biomedical literature.” Scientometrics. Feb 2013. doi: 10.1007/s11192-013-0983-y
Hanson K, Aphinyanaphongs Y, Fu L. “Using Knowledge from APIs to Disambiguate Affiliation Names in MEDLINE.” AMIA Conference 2012.
Aphinyanaphongs Y, Fu L. “Connecting the Rails Framework to a VIVO Jena store.” VIVO Conference 2012.
McCrillis A, Hanson K, Aphinyanaphongs Y. “Analysis of Pubmed Query Logs to Guide Teaching Strategies.” MLA Conference 2012.
Invited Chapter: Aphinyanaphongs Y. A Gentle Introduction to Support Vector Machines in Biomedicine (Volume 2). World Scientific Publishing Company. 2012.
Hoffman, EP, Aphinyanaphongs Y, Giovanni, MA, Murray MF “A Strategy for the Use of a Patient Data Registry in the Diagnosis of Monogenic Disease” ACMG Conference 2012.
Fu, Lawrence D; Aphinyanaphongs, Yindalon; Wang, Lily; Aliferis, Constantin F. "A comparison of evaluation metrics for biomedical journals, articles, and websites in terms of sensitivity to topic". Journal of biomedical informatics. 2011 Aug;44(4):587-594
Aliferis, C F; Alekseyenko, A V; Aphinyanaphongs, Y; Brown, S; Fenyo, D; Fu, L; Shen, S; Statnikov, A; Wang, J. "Trends and developments in bioinformatics in 2010: prospects and perspectives". Yearbook of medical informatics. 2011;6(1):146-155
Aphinyanaphongs, Y, Jerome, R, Aliferis C. "Formative Comparative Evaluation of Traditional and Recent Quality-Content Filters for Answering Clinical Questions with MEDLINE." Medical Library Association Annual Meeting and Exhibition 2007, Philadelphia, PA.
Aphinyanaphongs, Y, Aliferis C. “Text Categorization Models for Identifying Unproven Cancer Treatments on the Web.” In: Medinfo 2007; Sydney, Australia.
Fu L, Wang L, Aphinyanaphongs Y, Aliferis C. “A Comparison of Impact Factor, Clinical Query Filters, and Pattern Recognition Query Filters in Terms of Sensitivity to Topic.” In: Medinfo 2007; Sydney, Australia.
Aphinyanaphongs Y, Aliferis C. “Prospective Validation of Text Categorization Filters for Identifying High Quality, Content-Specific Articles in MEDLINE.” In: Proceedings AMIA Symposium; 2006; Washington DC.
Aphinyanaphongs Y, Statnikov A, Aliferis C. “A Comparison of Citation Metrics to Machine Learning Filters for the Identification of High Quality MEDLINE Documents.” J American Medical Informatics Association. 2006; 13 (4): 446- 455.
Bernstam E, Herskovic J, Aphinyanaphongs Y, Aliferis C. “Using Citation Data to Improve Retrieval from MEDLINE.” J American Medical Informatics Association. 2006; 13 (1): 96-105.
Bernstam E, Strasberg H, Haynes B, Aphinyanaphongs Y. “Clinical Knowledge: Moving Beyond Relevance to Importance.” Panelist. In: Proceedings AMIA Symposium; 2005; Washington DC.
Aphinyanaphongs Y, Statnikov A, Tsamardinos I, Hardin D, Aliferis, C. “Text Categorization Models for High Quality Article Retrieval in Internal Medicine.” J American Medical Informatics Association. 2005; 12 (2): 207-216.
Aphinyanaphongs Y, Aliferis C. “Learning Boolean Queries for Article Quality Filtering.” In: MEDINFO; 2004; San Francisco, CA; 2004.
Aphinyanaphongs Y, Aliferis C. “Text Categorization Models for Retrieval of High Quality Articles in Internal Medicine.” In: Proceedings AMIA Symposium; 2003; Washington DC; 2003.